IonicModel - This class implements an ionic model. More...

#include <IonicTenTusscher06.hpp>

Inheritance diagram for IonicTenTusscher06:

Collaboration diagram for IonicTenTusscher06:

Public Types
enum	WallFlag { Endo, Epi, MCell }
	Solves the ionic model. More...

Public Types inherited from ElectroIonicModel
typedef VectorEpetra	vector_Type

typedef std::shared_ptr< VectorEpetra >	vectorPtr_Type

typedef std::shared_ptr< VectorElemental >	elvecPtr_Type

typedef RegionMesh< LinearTetra >	mesh_Type

typedef MatrixEpetra< Real >	matrix_Type

typedef std::shared_ptr< matrix_Type >	matrixPtr_Type

typedef FESpace< mesh_Type, MapEpetra >	feSpace_Type

typedef std::shared_ptr< feSpace_Type >	feSpacePtr_Type

typedef std::function< Real(const Real &t, const Real &x, const Real &y, const Real &z, const ID &i) >	function_Type

typedef FactorySingleton< Factory< ElectroIonicModel, std::string > >	IonicModelFactory

Public Member Functions
WallFlag	getFlag ()

Public Member Functions inherited from ElectroIonicModel
virtual matrix_Type	getJac (const vector_Type &v, Real h=1.0e-8)
	This methods computes the Jacobian numerically. More...

virtual std::vector< std::vector< Real > >	getJac (const std::vector< Real > &v, Real h=1.0e-8)
	This methods computes the Jacobian numerically. More...

virtual void	computeGatingRhs (const std::vector< vectorPtr_Type > &v, std::vector< vectorPtr_Type > &rhs)
	This methods computes the right hand side of the gating variables in the 3D case. More...

virtual void	computeNonGatingRhs (const std::vector< vectorPtr_Type > &v, std::vector< vectorPtr_Type > &rhs)
	This methods computes the right hand side of the state variables that are not gating variables in the 3D case. More...

virtual void	computeGatingVariablesWithRushLarsen (std::vector< vectorPtr_Type > &v, const Real dt)
	Compute the new value of the gating variables in 3D with the Rush Larsen method specified in the 0D version of the ionic model. More...

virtual void	computeRhs (const std::vector< vectorPtr_Type > &v, std::vector< vectorPtr_Type > &rhs)
	Compute the right hand side of the ionic model in 3D. More...

virtual void	computePotentialRhsICI (const std::vector< vectorPtr_Type > &v, std::vector< vectorPtr_Type > &rhs, matrix_Type &massMatrix)
	Compute the right hand side of the voltage equation linearly interpolating the ionic currents. More...

virtual void	computePotentialRhsSVI (const std::vector< vectorPtr_Type > &v, std::vector< vectorPtr_Type > &rhs, FESpace< mesh_Type, MapEpetra > &uFESpace)
	Compute the right hand side of the voltage equation using SVI. More...

virtual void	computePotentialRhsSVI (const std::vector< vectorPtr_Type > &v, std::vector< vectorPtr_Type > &rhs, FESpace< mesh_Type, MapEpetra > &uFESpace, const QuadratureRule &qr)
	Compute the right hand side of the voltage equation using SVI specifying the quadrature rule. More...

virtual void	initialize (std::vector< Real > &v)
	Initialize the ionic model with a given vector of state variable (0D version) More...

virtual void	initialize (std::vector< vectorPtr_Type > &v)
	Initialize the ionic model in 3D with a given vector of state variable vector pointers. More...

	ElectroIonicModel ()
	Empty Constructor. More...

	ElectroIonicModel (int n)
	Constructor. More...

	ElectroIonicModel (int n, int g)
	Constructor. More...

	ElectroIonicModel (const ElectroIonicModel &Ionic)
	Copy Constructor. More...

virtual	~ElectroIonicModel ()
	Destructor. More...

virtual void	setup (Teuchos::ParameterList &parameterList)
	setup the parameters of the ionic model from an xml file More...

const short int	Size () const
	returns the number of equations of the ionic model More...

const short int	numberOfGatingVariables () const
	returns the number of gating variables in the ionic model More...

const Real	membraneCapacitance () const
	returns the value of the membrane capacitance in the model More...

const Real	appliedCurrent () const
	returns the value of the applied current in the model/point More...

vectorPtr_Type	appliedCurrentPtr ()
	returns the pointer to the applied current FE vector in the 3D case More...

const std::vector< Real >	restingConditions () const
	returns the vector with the resting values of the variables in the ionic model More...

const function_Type	pacaingProtocol () const
	returns the function describing the pacing protocol for the ionic model More...

void	setMembraneCapacitance (const Real p)
	set the membrane capacitance in the ionic model More...

void	setAppliedCurrent (const Real p)
	set the applied current in the ionic model/point More...

void	setAppliedCurrentPtr (const vectorPtr_Type p)
	set the pointer to the applied current in the 3D ionic model More...

void	setAppliedCurrent (const vector_Type &p)
	set the pointer to the applied current in the 3D ionic model More...

void	setAppliedCurrentFromFunction (function_Type &f, feSpacePtr_Type feSpacePtr, Real time=0.0)
	Interpolate the function f on the FE space feSpacePtr at time time. More...

void	setAppliedCurrentFromElectroStimulus (ElectroStimulus &stimulus, feSpacePtr_Type feSpacePtr, Real time=0.0)
	Interpolate the function of the electro stimulus. More...

void	setPacingProtocol (function_Type pacingProtocol)
	Set the pacing protocol as boost function. More...

void	setRestingCondtions (Real value, int j)
	Set component of the resting conditions. More...

void	setRestingCondtions (std::vector< Real > &restingConditions)
	Set resting conditions. More...

void	addAppliedCurrent (Real &rhs)
	Simple wrapper to add the applied current. More...

void	addAppliedCurrent (std::vector< Real > &rhs)
	Simple wrapper to add the applied current. More...

ElectroIonicModel &	operator= (const ElectroIonicModel &Ionic)
	Assignment operator. More...

Private Attributes
Real	knak
	Model Parameters. More...

Real	KmNa

Real	KmK

Real	knaca

Real	KmNai

Real	KmCa

Real	ksat

Real	n

Real	Ko

Real	Cao

Real	Nao

Real	Bufc

Real	Kbufc

Real	Bufsr

Real	Kbufsr

Real	Bufss

Real	Kbufss

Real	Vmaxup

Real	Kup

Real	Vrel

Real	k1_

Real	k2_

Real	k3

Real	k4

Real	EC

Real	maxsr

Real	minsr

Real	Vleak

Real	Vxfer

Real	pKNa

Real	RTONF

Real	F

Real	R

Real	T

Real	Gkr

Real	Gks

Real	GK1

Real	Gto

Real	GNa

Real	GbNa

Real	GCaL

Real	GbCa

Real	GpCa

Real	KpCa

Real	GpK

Real	Vc

Real	Vsr

Real	Vss

Real	inverseVcF2

Real	inverseVcF

Real	inversevssF2

WallFlag	flag

Real	M_cellularCapacitance

Type definitions
typedef ElectroIonicModel	super

typedef std::shared_ptr< VectorEpetra >	vectorPtr_Type

typedef std::shared_ptr< VectorElemental >	elvecPtr_Type

typedef RegionMesh< LinearTetra >	mesh_Type

Constructors & Destructor
	IonicTenTusscher06 ()
	Constructor. More...

	IonicTenTusscher06 (Teuchos::ParameterList &parameterList)

	IonicTenTusscher06 (const IonicTenTusscher06 &model)

virtual	~IonicTenTusscher06 ()
	Destructor. More...

Overloads
IonicTenTusscher06 &	operator= (const IonicTenTusscher06 &model)
	Operator. More...

Setters and getters
Real	getknak () const

Real	getKmNa () const

Real	getKmK () const

Real	getknaca () const

Real	getKmNai () const

Real	getKmCa () const

Real	getksat () const

Real	getn () const

Real	getKo () const

Real	getCao () const

Real	getNao () const

Real	getBufc () const

Real	getKbufc () const

Real	getBufsr () const

Real	getKbufsr () const

Real	getBufss () const

Real	getKbufss () const

Real	getVmaxup () const

Real	getKup () const

Real	getVrel () const

Real	getk1_ () const

Real	getk2_ () const

Real	getk3 () const

Real	getk4 () const

Real	getEC () const

Real	getmaxsr () const

Real	getminsr () const

Real	getVleak () const

Real	getVxfer () const

Real	getpKNa () const

Real	getRTONF () const

Real	getF () const

Real	getR () const

Real	getT () const

Real	getGkr () const

Real	getGks () const

Real	getGK1 () const

Real	getGto () const

Real	getGNa () const

Real	getGbNa () const

Real	getGCaL () const

Real	getGbCa () const

Real	getGpCa () const

Real	getKpCa () const

Real	getGpK () const

Real	getVc () const

Real	getVsr () const

Real	getVss () const

void	setknak (const Real p)

void	setKmNa (const Real p)

void	setKmK (const Real p)

void	setknaca (const Real p)

void	setKmNai (const Real p)

void	setKmCa (const Real p)

void	setksat (const Real p)

void	setn (const Real p)

void	setKo (const Real p)

void	setCao (const Real p)

void	setNao (const Real p)

void	setBufc (const Real p)

void	setKbufc (const Real p)

void	setBufsr (const Real p)

void	setKbufsr (const Real p)

void	setBufss (const Real p)

void	setKbufss (const Real p)

void	setVmaxup (const Real p)

void	setKup (const Real p)

void	setVrel (const Real p)

void	setk1_ (const Real p)

void	setk2_ (const Real p)

void	setk3 (const Real p)

void	setk4 (const Real p)

void	setEC (const Real p)

void	setmaxsr (const Real p)

void	setminsr (const Real p)

void	setVleak (const Real p)

void	setVxfer (const Real p)

void	setpKNa (const Real p)

void	setF (const Real p)

void	setR (const Real p)

void	setT (const Real p)

void	computeRTONF ()

void	setGkr (const Real p)

void	setGks (const Real p)

void	setGK1 (const Real p)

void	setGto (const Real p)

void	setGNa (const Real p)

void	setGbNa (const Real p)

void	setGCaL (const Real p)

void	setGbCa (const Real p)

void	setGpCa (const Real p)

void	setKpCa (const Real p)

void	setGpK (const Real p)

void	setVc (const Real p)

void	setVsr (const Real p)

void	setVss (const Real p)

void	computeinverseVcF2 ()

void	computeinverseVcF ()

void	computeinversevssF2 ()

Real	Ek (Real Ki)

Real	Ena (Real Nai)

Real	Eks (Real Ki, Real Nai)

Real	Eca (Real Cai)

Real	Ak1 (Real V, Real Ki)

Real	Bk1 (Real V, Real Ki)

Real	rec_iK1 (Real V, Real Ki)

Real	rec_iNaK (Real V)

Real	rec_ipK (Real V)

Methods
Real	INa (Real V, Real m, Real h, Real j, Real Nai)

Real	ICaL (Real V, Real d, Real f, Real f2, Real fcass, Real CaSS)

Real	Ito (Real V, Real r, Real s, Real Ki)

Real	IKr (Real V, Real xr1, Real xr2, Real Ki)

Real	IKs (Real V, Real xs, Real Ki, Real Nai)

Real	IK1 (Real V, Real Ki)

Real	INaCa (Real V, Real Nai, Real Cai)

Real	INaK (Real V, Real Nai)

Real	IpCa (Real Cai)

Real	IpK (Real V, Real Ki)

Real	IbNa (Real V, Real Nai)

Real	IbCa (Real V, Real Cai)

Real	Itot (Real V, Real m, Real h, Real j, Real d, Real f, Real f2, Real fcass, Real r, Real s, Real xr1, Real xr2, Real xs, Real Nai, Real Ki, Real Cai, Real CaSS)

Real	kCaSR (Real CaSR)

Real	k1 (Real CaSR)

Real	k2 (Real CaSR)

Real	dRR (Real CaSR, Real CaSS, Real RR)

Real	solveRR (Real CaSR, Real CaSS, Real RR, Real HT)

Real	OO (Real CaSR, Real CaSS, Real RR)

Real	Irel (Real CaSR, Real CaSS, Real RR)

Real	Ileak (Real CaSR, Real Cai)

Real	Iup (Real Cai)

Real	Ixfer (Real CaSS, Real Cai)

Real	CaCSQN (Real CaSR)

Real	dCaSR (Real Cai, Real CaSR, Real CaSS, Real RR, Real HT=1.0)

Real	bjsr (Real Cai, Real CaSR, Real CaSS, Real RR, Real HT)

Real	cjsr (Real Cai, Real CaSR, Real CaSS, Real RR, Real HT)

Real	solveCaSR (Real Cai, Real CaSR, Real CaSS, Real RR, Real HT)

Real	CaSSBuf (Real CaSS)

Real	dCaSS (Real Cai, Real CaSR, Real CaSS, Real RR, Real V, Real d, Real f, Real f2, Real fcass, Real HT=1.0)

Real	bcss (Real Cai, Real CaSR, Real CaSS, Real RR, Real V, Real d, Real f, Real f2, Real fcass, Real HT)

Real	ccss (Real Cai, Real CaSR, Real CaSS, Real RR, Real V, Real d, Real f, Real f2, Real fcass, Real HT)

Real	solveCaSS (Real Cai, Real CaSR, Real CaSS, Real RR, Real V, Real d, Real f, Real f2, Real fcass, Real HT)

Real	CaBuf (Real Cai)

Real	dCai (Real V, Real Nai, Real Cai, Real CaSR, Real CaSS, Real HT=1.0)

Real	bc (Real V, Real Nai, Real Cai, Real CaSR, Real CaSS, Real HT)

Real	cc (Real V, Real Nai, Real Cai, Real CaSR, Real CaSS, Real HT)

Real	solveCai (Real V, Real Nai, Real Cai, Real CaSR, Real CaSS, Real HT)

Real	dNai (Real V, Real m, Real h, Real j, Real Nai, Real Cai)

Real	solveNai (Real V, Real m, Real h, Real j, Real Nai, Real Cai, Real HT)

Real	dKi (Real V, Real r, Real s, Real xr1, Real xr2, Real xs, Real Nai, Real Ki)

Real	solveKi (Real V, Real r, Real s, Real xr1, Real xr2, Real xs, Real Nai, Real Ki, Real HT)

Real	AM (Real V)

Real	BM (Real V)

Real	TAU_M (Real V)

Real	M_INF (Real V)

Real	AH (Real V)

Real	BH (Real V)

Real	TAU_H (Real V)

Real	H_INF (Real V)

Real	AJ (Real V)

Real	BJ (Real V)

Real	TAU_J (Real V)

Real	J_INF (Real V)

Real	Xr1_INF (Real V)

Real	axr1 (Real V)

Real	bxr1 (Real V)

Real	TAU_Xr1 (Real V)

Real	Xr2_INF (Real V)

Real	axr2 (Real V)

Real	bxr2 (Real V)

Real	TAU_Xr2 (Real V)

Real	Xs_INF (Real V)

Real	Axs (Real V)

Real	Bxs (Real V)

Real	TAU_Xs (Real V)

Real	R_INF (Real V)

Real	S_INF (Real V)

Real	TAU_R (Real V)

Real	TAU_S (Real V)

Real	D_INF (Real V)

Real	Ad (Real V)

Real	Bd (Real V)

Real	Cd (Real V)

Real	TAU_D (Real V)

Real	F_INF (Real V)

Real	Af (Real V)

Real	Bf (Real V)

Real	Cf (Real V)

Real	TAU_F (Real V)

Real	F2_INF (Real V)

Real	Af2 (Real V)

Real	Bf2 (Real V)

Real	Cf2 (Real V)

Real	TAU_F2 (Real V)

Real	FCaSS_INF (Real CaSS)

Real	TAU_FCaSS (Real CaSS)

Real	solveM (Real V, Real m, Real HT)

Real	solveH (Real V, Real h, Real HT)

Real	solveJ (Real V, Real j, Real HT)

Real	solveXr1 (Real V, Real xr1, Real HT)

Real	solveXr2 (Real V, Real xr2, Real HT)

Real	solveXs (Real V, Real xs, Real HT)

Real	solveS (Real V, Real s, Real HT)

Real	solveR (Real V, Real r, Real HT)

Real	solveD (Real V, Real d, Real HT)

Real	solveF (Real V, Real f, Real HT)

Real	solveF2 (Real V, Real f2, Real HT)

Real	solveFCaSS (Real CaSS, Real fcass, Real HT)

Real	dM (Real V, Real m)

Real	dH (Real V, Real h)

Real	dJ (Real V, Real j)

Real	dXr1 (Real V, Real xr1)

Real	dXr2 (Real V, Real xr2)

Real	dXs (Real V, Real xs)

Real	dS (Real V, Real s)

Real	dR (Real V, Real r)

Real	dD (Real V, Real d)

Real	dF (Real V, Real f)

Real	dF2 (Real V, Real f2)

Real	dFCaSS (Real CaSS, Real fcass)

Real	solveV (Real V, Real m, Real h, Real j, Real d, Real f, Real f2, Real fcass, Real r, Real s, Real xr1, Real xr2, Real xs, Real Nai, Real Ki, Real Cai, Real CaSS, Real HT)

void	computeGatingRhs (const std::vector< Real > &v, std::vector< Real > &rhs)
	Methods. More...

void	computeNonGatingRhs (const std::vector< Real > &v, std::vector< Real > &rhs)
	In the case this method is improperly used, it should use this default implementation. More...

void	computeRhs (const std::vector< Real > &v, std::vector< Real > &rhs)
	This methods contains the actual evaluation of the rhs of all state variablesin the model (0D version) More...

Real	computeLocalPotentialRhs (const std::vector< Real > &v)
	This methods contains the actual evaluation of the rhs of the voltage equation only (0D version) More...

void	computeGatingVariablesWithRushLarsen (std::vector< Real > &v, const Real dt)
	This methods contains the actual evaluation of the rhs of the voltage equation only (0D version) More...

void	showMe ()
	Display information about the model. More...

void	showCurrents (std::vector< Real > &v)

void	showCurrents (Real V, Real m, Real h, Real j, Real d, Real f, Real f2, Real fcass, Real r, Real s, Real xr1, Real xr2, Real xs, Real Nai, Real Ki, Real Cai, Real CaSS)

void	solveOneStep (std::vector< Real > &v, Real dt)

Additional Inherited Members
Protected Attributes inherited from ElectroIonicModel
short int	M_numberOfEquations

short int	M_numberOfGatingVariables

std::vector< Real >	M_restingConditions

Real	M_membraneCapacitance

Real	M_appliedCurrent

vectorPtr_Type	M_appliedCurrentPtr

function_Type	M_pacingProtocol

Detailed Description

IonicModel - This class implements an ionic model.

Definition at line 71 of file IonicTenTusscher06.hpp.

Member Typedef Documentation

◆ super

typedef ElectroIonicModel super

Definition at line 77 of file IonicTenTusscher06.hpp.

◆ vectorPtr_Type

typedef std::shared_ptr<VectorEpetra> vectorPtr_Type

Definition at line 78 of file IonicTenTusscher06.hpp.

◆ elvecPtr_Type

typedef std::shared_ptr<VectorElemental> elvecPtr_Type

Definition at line 79 of file IonicTenTusscher06.hpp.

◆ mesh_Type

typedef RegionMesh<LinearTetra> mesh_Type

Definition at line 80 of file IonicTenTusscher06.hpp.

Member Enumeration Documentation

◆ WallFlag

enum WallFlag

Solves the ionic model.

Enumerator
Endo
Epi
MCell

Definition at line 1201 of file IonicTenTusscher06.hpp.

Constructor & Destructor Documentation

◆ IonicTenTusscher06() [1/3]

IonicTenTusscher06 ( )

Constructor.

Constructors.

Definition at line 48 of file IonicTenTusscher06.cpp.

◆ IonicTenTusscher06() [2/3]

IonicTenTusscher06 ( Teuchos::ParameterList & parameterList )

Parameters

Epetra	communicator
list	of parameters in an xml file

Definition at line 233 of file IonicTenTusscher06.cpp.

◆ IonicTenTusscher06() [3/3]

IonicTenTusscher06 ( const IonicTenTusscher06 & model )

Parameters

IonicTenTusscher06 object

Definition at line 349 of file IonicTenTusscher06.cpp.

◆ ~IonicTenTusscher06()

virtual ~IonicTenTusscher06 ( )

inlinevirtual

Destructor.

Definition at line 102 of file IonicTenTusscher06.hpp.

Member Function Documentation

◆ operator=()

IonicTenTusscher06 & operator= ( const IonicTenTusscher06 & model )

Operator.

Definition at line 427 of file IonicTenTusscher06.cpp.

◆ getknak()

Real getknak ( ) const

inline

Definition at line 117 of file IonicTenTusscher06.hpp.

◆ getKmNa()

Real getKmNa ( ) const

inline

Definition at line 121 of file IonicTenTusscher06.hpp.

◆ getKmK()

Real getKmK ( ) const

inline

Definition at line 125 of file IonicTenTusscher06.hpp.

◆ getknaca()

Real getknaca ( ) const

inline

Definition at line 129 of file IonicTenTusscher06.hpp.

◆ getKmNai()

Real getKmNai ( ) const

inline

Definition at line 133 of file IonicTenTusscher06.hpp.

◆ getKmCa()

Real getKmCa ( ) const

inline

Definition at line 137 of file IonicTenTusscher06.hpp.

◆ getksat()

Real getksat ( ) const

inline

Definition at line 141 of file IonicTenTusscher06.hpp.

◆ getn()

Real getn ( ) const

inline

Definition at line 145 of file IonicTenTusscher06.hpp.

◆ getKo()

Real getKo ( ) const

inline

Definition at line 151 of file IonicTenTusscher06.hpp.

◆ getCao()

Real getCao ( ) const

inline

Definition at line 155 of file IonicTenTusscher06.hpp.

◆ getNao()

Real getNao ( ) const

inline

Definition at line 159 of file IonicTenTusscher06.hpp.

◆ getBufc()

Real getBufc ( ) const

inline

Definition at line 165 of file IonicTenTusscher06.hpp.

◆ getKbufc()

Real getKbufc ( ) const

inline

Definition at line 169 of file IonicTenTusscher06.hpp.

◆ getBufsr()

Real getBufsr ( ) const

inline

Definition at line 173 of file IonicTenTusscher06.hpp.

◆ getKbufsr()

Real getKbufsr ( ) const

inline

Definition at line 177 of file IonicTenTusscher06.hpp.

◆ getBufss()

Real getBufss ( ) const

inline

Definition at line 181 of file IonicTenTusscher06.hpp.

◆ getKbufss()

Real getKbufss ( ) const

inline

Definition at line 185 of file IonicTenTusscher06.hpp.

◆ getVmaxup()

Real getVmaxup ( ) const

inline

Definition at line 190 of file IonicTenTusscher06.hpp.

◆ getKup()

Real getKup ( ) const

inline

Definition at line 194 of file IonicTenTusscher06.hpp.

◆ getVrel()

Real getVrel ( ) const

inline

Definition at line 198 of file IonicTenTusscher06.hpp.

◆ getk1_()

Real getk1_ ( ) const

inline

Definition at line 202 of file IonicTenTusscher06.hpp.

◆ getk2_()

Real getk2_ ( ) const

inline

Definition at line 206 of file IonicTenTusscher06.hpp.

◆ getk3()

Real getk3 ( ) const

inline

Definition at line 210 of file IonicTenTusscher06.hpp.

◆ getk4()

Real getk4 ( ) const

inline

Definition at line 214 of file IonicTenTusscher06.hpp.

◆ getEC()

Real getEC ( ) const

inline

Definition at line 218 of file IonicTenTusscher06.hpp.

◆ getmaxsr()

Real getmaxsr ( ) const

inline

Definition at line 222 of file IonicTenTusscher06.hpp.

◆ getminsr()

Real getminsr ( ) const

inline

Definition at line 226 of file IonicTenTusscher06.hpp.

◆ getVleak()

Real getVleak ( ) const

inline

Definition at line 230 of file IonicTenTusscher06.hpp.

◆ getVxfer()

Real getVxfer ( ) const

inline

Definition at line 234 of file IonicTenTusscher06.hpp.

◆ getpKNa()

Real getpKNa ( ) const

inline

Definition at line 240 of file IonicTenTusscher06.hpp.

◆ getRTONF()

Real getRTONF ( ) const

inline

Definition at line 246 of file IonicTenTusscher06.hpp.

◆ getF()

Real getF ( ) const

inline

Definition at line 250 of file IonicTenTusscher06.hpp.

◆ getR()

Real getR ( ) const

inline

Definition at line 254 of file IonicTenTusscher06.hpp.

◆ getT()

Real getT ( ) const

inline

Definition at line 258 of file IonicTenTusscher06.hpp.

◆ getGkr()

Real getGkr ( ) const

inline

Definition at line 264 of file IonicTenTusscher06.hpp.

◆ getGks()

Real getGks ( ) const

inline

Definition at line 268 of file IonicTenTusscher06.hpp.

◆ getGK1()

Real getGK1 ( ) const

inline

Definition at line 272 of file IonicTenTusscher06.hpp.

◆ getGto()

Real getGto ( ) const

inline

Definition at line 276 of file IonicTenTusscher06.hpp.

◆ getGNa()

Real getGNa ( ) const

inline

Definition at line 280 of file IonicTenTusscher06.hpp.

◆ getGbNa()

Real getGbNa ( ) const

inline

Definition at line 284 of file IonicTenTusscher06.hpp.

◆ getGCaL()

Real getGCaL ( ) const

inline

Definition at line 288 of file IonicTenTusscher06.hpp.

◆ getGbCa()

Real getGbCa ( ) const

inline

Definition at line 292 of file IonicTenTusscher06.hpp.

◆ getGpCa()

Real getGpCa ( ) const

inline

Definition at line 296 of file IonicTenTusscher06.hpp.

◆ getKpCa()

Real getKpCa ( ) const

inline

Definition at line 300 of file IonicTenTusscher06.hpp.

◆ getGpK()

Real getGpK ( ) const

inline

Definition at line 304 of file IonicTenTusscher06.hpp.

◆ getVc()

Real getVc ( ) const

inline

Definition at line 310 of file IonicTenTusscher06.hpp.

◆ getVsr()

Real getVsr ( ) const

inline

Definition at line 314 of file IonicTenTusscher06.hpp.

◆ getVss()

Real getVss ( ) const

inline

Definition at line 318 of file IonicTenTusscher06.hpp.

◆ setknak()

void setknak ( const Real p )

inline

Definition at line 323 of file IonicTenTusscher06.hpp.

◆ setKmNa()

void setKmNa ( const Real p )

inline

Definition at line 327 of file IonicTenTusscher06.hpp.

◆ setKmK()

void setKmK ( const Real p )

inline

Definition at line 331 of file IonicTenTusscher06.hpp.

◆ setknaca()

void setknaca ( const Real p )

inline

Definition at line 335 of file IonicTenTusscher06.hpp.

◆ setKmNai()

void setKmNai ( const Real p )

inline

Definition at line 339 of file IonicTenTusscher06.hpp.

◆ setKmCa()

void setKmCa ( const Real p )

inline

Definition at line 343 of file IonicTenTusscher06.hpp.

◆ setksat()

void setksat ( const Real p )

inline

Definition at line 347 of file IonicTenTusscher06.hpp.

◆ setn()

void setn ( const Real p )

inline

Definition at line 351 of file IonicTenTusscher06.hpp.

◆ setKo()

void setKo ( const Real p )

inline

Definition at line 357 of file IonicTenTusscher06.hpp.

◆ setCao()

void setCao ( const Real p )

inline

Definition at line 361 of file IonicTenTusscher06.hpp.

◆ setNao()

void setNao ( const Real p )

inline

Definition at line 365 of file IonicTenTusscher06.hpp.

◆ setBufc()

void setBufc ( const Real p )

inline

Definition at line 371 of file IonicTenTusscher06.hpp.

◆ setKbufc()

void setKbufc ( const Real p )

inline

Definition at line 375 of file IonicTenTusscher06.hpp.

◆ setBufsr()

void setBufsr ( const Real p )

inline

Definition at line 379 of file IonicTenTusscher06.hpp.

◆ setKbufsr()

void setKbufsr ( const Real p )

inline

Definition at line 383 of file IonicTenTusscher06.hpp.

◆ setBufss()

void setBufss ( const Real p )

inline

Definition at line 387 of file IonicTenTusscher06.hpp.

◆ setKbufss()

void setKbufss ( const Real p )

inline

Definition at line 391 of file IonicTenTusscher06.hpp.

◆ setVmaxup()

void setVmaxup ( const Real p )

inline

Definition at line 396 of file IonicTenTusscher06.hpp.

◆ setKup()

void setKup ( const Real p )

inline

Definition at line 400 of file IonicTenTusscher06.hpp.

◆ setVrel()

void setVrel ( const Real p )

inline

Definition at line 404 of file IonicTenTusscher06.hpp.

◆ setk1_()

void setk1_ ( const Real p )

inline

Definition at line 408 of file IonicTenTusscher06.hpp.

◆ setk2_()

void setk2_ ( const Real p )

inline

Definition at line 412 of file IonicTenTusscher06.hpp.

◆ setk3()

void setk3 ( const Real p )

inline

Definition at line 416 of file IonicTenTusscher06.hpp.

◆ setk4()

void setk4 ( const Real p )

inline

Definition at line 420 of file IonicTenTusscher06.hpp.

◆ setEC()

void setEC ( const Real p )

inline

Definition at line 424 of file IonicTenTusscher06.hpp.

◆ setmaxsr()

void setmaxsr ( const Real p )

inline

Definition at line 428 of file IonicTenTusscher06.hpp.

◆ setminsr()

void setminsr ( const Real p )

inline

Definition at line 432 of file IonicTenTusscher06.hpp.

◆ setVleak()

void setVleak ( const Real p )

inline

Definition at line 436 of file IonicTenTusscher06.hpp.

◆ setVxfer()

void setVxfer ( const Real p )

inline

Definition at line 440 of file IonicTenTusscher06.hpp.

◆ setpKNa()

void setpKNa ( const Real p )

inline

Definition at line 446 of file IonicTenTusscher06.hpp.

◆ setF()

void setF ( const Real p )

inline

Definition at line 452 of file IonicTenTusscher06.hpp.

◆ setR()

void setR ( const Real p )

inline

Definition at line 457 of file IonicTenTusscher06.hpp.

◆ setT()

void setT ( const Real p )

inline

Definition at line 462 of file IonicTenTusscher06.hpp.

◆ computeRTONF()

void computeRTONF ( )

inline

Definition at line 468 of file IonicTenTusscher06.hpp.

◆ setGkr()

void setGkr ( const Real p )

inline

Definition at line 473 of file IonicTenTusscher06.hpp.

◆ setGks()

void setGks ( const Real p )

inline

Definition at line 477 of file IonicTenTusscher06.hpp.

◆ setGK1()

void setGK1 ( const Real p )

inline

Definition at line 481 of file IonicTenTusscher06.hpp.

◆ setGto()

void setGto ( const Real p )

inline

Definition at line 485 of file IonicTenTusscher06.hpp.

◆ setGNa()

void setGNa ( const Real p )

inline

Definition at line 489 of file IonicTenTusscher06.hpp.

◆ setGbNa()

void setGbNa ( const Real p )

inline

Definition at line 493 of file IonicTenTusscher06.hpp.

◆ setGCaL()

void setGCaL ( const Real p )

inline

Definition at line 497 of file IonicTenTusscher06.hpp.

◆ setGbCa()

void setGbCa ( const Real p )

inline

Definition at line 501 of file IonicTenTusscher06.hpp.

◆ setGpCa()

void setGpCa ( const Real p )

inline

Definition at line 505 of file IonicTenTusscher06.hpp.

◆ setKpCa()

void setKpCa ( const Real p )

inline

Definition at line 509 of file IonicTenTusscher06.hpp.

◆ setGpK()

void setGpK ( const Real p )

inline

Definition at line 513 of file IonicTenTusscher06.hpp.

◆ setVc()

void setVc ( const Real p )

inline

Definition at line 519 of file IonicTenTusscher06.hpp.

◆ setVsr()

void setVsr ( const Real p )

inline

Definition at line 523 of file IonicTenTusscher06.hpp.

◆ setVss()

void setVss ( const Real p )

inline

Definition at line 527 of file IonicTenTusscher06.hpp.

◆ computeinverseVcF2()

void computeinverseVcF2 ( )

inline

Definition at line 533 of file IonicTenTusscher06.hpp.

◆ computeinverseVcF()

void computeinverseVcF ( )

inline

Definition at line 537 of file IonicTenTusscher06.hpp.

◆ computeinversevssF2()

void computeinversevssF2 ( )

inline

Definition at line 541 of file IonicTenTusscher06.hpp.

◆ Ek()

Real Ek ( Real Ki )

inline

Definition at line 549 of file IonicTenTusscher06.hpp.

◆ Ena()

Real Ena ( Real Nai )

inline

Definition at line 553 of file IonicTenTusscher06.hpp.

◆ Eks()

Real Eks	(	Real	Ki,
		Real	Nai
	)

inline

Definition at line 557 of file IonicTenTusscher06.hpp.

◆ Eca()

Real Eca ( Real Cai )

inline

Definition at line 561 of file IonicTenTusscher06.hpp.

◆ Ak1()

Real Ak1	(	Real	V,
		Real	Ki
	)

inline

Definition at line 565 of file IonicTenTusscher06.hpp.

◆ Bk1()

Real Bk1	(	Real	V,
		Real	Ki
	)

inline

Definition at line 569 of file IonicTenTusscher06.hpp.

◆ rec_iK1()

Real rec_iK1	(	Real	V,
		Real	Ki
	)

inline

Definition at line 575 of file IonicTenTusscher06.hpp.

◆ rec_iNaK()

Real rec_iNaK ( Real V )

inline

Definition at line 579 of file IonicTenTusscher06.hpp.

◆ rec_ipK()

Real rec_ipK ( Real V )

inline

Definition at line 584 of file IonicTenTusscher06.hpp.

◆ INa()

Real INa	(	Real	V,
		Real	m,
		Real	h,
		Real	j,
		Real	Nai
	)

inline

Definition at line 596 of file IonicTenTusscher06.hpp.

◆ ICaL()

Real ICaL	(	Real	V,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	CaSS
	)

inline

Definition at line 600 of file IonicTenTusscher06.hpp.

◆ Ito()

Real Ito	(	Real	V,
		Real	r,
		Real	s,
		Real	Ki
	)

inline

Definition at line 607 of file IonicTenTusscher06.hpp.

◆ IKr()

Real IKr	(	Real	V,
		Real	xr1,
		Real	xr2,
		Real	Ki
	)

inline

Definition at line 611 of file IonicTenTusscher06.hpp.

◆ IKs()

Real IKs	(	Real	V,
		Real	xs,
		Real	Ki,
		Real	Nai
	)

inline

Definition at line 615 of file IonicTenTusscher06.hpp.

◆ IK1()

Real IK1	(	Real	V,
		Real	Ki
	)

inline

Definition at line 630 of file IonicTenTusscher06.hpp.

◆ INaCa()

Real INaCa	(	Real	V,
		Real	Nai,
		Real	Cai
	)

inline

Definition at line 634 of file IonicTenTusscher06.hpp.

◆ INaK()

Real INaK	(	Real	V,
		Real	Nai
	)

inline

Definition at line 641 of file IonicTenTusscher06.hpp.

◆ IpCa()

Real IpCa ( Real Cai )

inline

Definition at line 645 of file IonicTenTusscher06.hpp.

◆ IpK()

Real IpK	(	Real	V,
		Real	Ki
	)

inline

Definition at line 649 of file IonicTenTusscher06.hpp.

◆ IbNa()

Real IbNa	(	Real	V,
		Real	Nai
	)

inline

Definition at line 653 of file IonicTenTusscher06.hpp.

◆ IbCa()

Real IbCa	(	Real	V,
		Real	Cai
	)

inline

Definition at line 657 of file IonicTenTusscher06.hpp.

◆ Itot()

Real Itot	(	Real	V,
		Real	m,
		Real	h,
		Real	j,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	r,
		Real	s,
		Real	xr1,
		Real	xr2,
		Real	xs,
		Real	Nai,
		Real	Ki,
		Real	Cai,
		Real	CaSS
	)

inline

Definition at line 661 of file IonicTenTusscher06.hpp.

◆ kCaSR()

Real kCaSR ( Real CaSR )

inline

Definition at line 681 of file IonicTenTusscher06.hpp.

◆ k1()

Real k1 ( Real CaSR )

inline

Definition at line 685 of file IonicTenTusscher06.hpp.

◆ k2()

Real k2 ( Real CaSR )

inline

Definition at line 689 of file IonicTenTusscher06.hpp.

◆ dRR()

Real dRR	(	Real	CaSR,
		Real	CaSS,
		Real	RR
	)

inline

Definition at line 693 of file IonicTenTusscher06.hpp.

◆ solveRR()

Real solveRR	(	Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	HT
	)

inline

Definition at line 697 of file IonicTenTusscher06.hpp.

◆ OO()

Real OO	(	Real	CaSR,
		Real	CaSS,
		Real	RR
	)

inline

Definition at line 701 of file IonicTenTusscher06.hpp.

◆ Irel()

Real Irel	(	Real	CaSR,
		Real	CaSS,
		Real	RR
	)

inline

Definition at line 706 of file IonicTenTusscher06.hpp.

◆ Ileak()

Real Ileak	(	Real	CaSR,
		Real	Cai
	)

inline

Definition at line 710 of file IonicTenTusscher06.hpp.

◆ Iup()

Real Iup ( Real Cai )

inline

Definition at line 714 of file IonicTenTusscher06.hpp.

◆ Ixfer()

Real Ixfer	(	Real	CaSS,
		Real	Cai
	)

inline

Definition at line 718 of file IonicTenTusscher06.hpp.

◆ CaCSQN()

Real CaCSQN ( Real CaSR )

inline

Definition at line 722 of file IonicTenTusscher06.hpp.

◆ dCaSR()

Real dCaSR	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	HT = `1.0`
	)

inline

Definition at line 726 of file IonicTenTusscher06.hpp.

◆ bjsr()

Real bjsr	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	HT
	)

inline

Definition at line 730 of file IonicTenTusscher06.hpp.

◆ cjsr()

Real cjsr	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	HT
	)

inline

Definition at line 734 of file IonicTenTusscher06.hpp.

◆ solveCaSR()

Real solveCaSR	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	HT
	)

inline

Definition at line 738 of file IonicTenTusscher06.hpp.

◆ CaSSBuf()

Real CaSSBuf ( Real CaSS )

inline

Definition at line 745 of file IonicTenTusscher06.hpp.

◆ dCaSS()

Real dCaSS	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	V,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	HT = `1.0`
	)

inline

Definition at line 749 of file IonicTenTusscher06.hpp.

◆ bcss()

Real bcss	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	V,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	HT
	)

inline

Definition at line 755 of file IonicTenTusscher06.hpp.

◆ ccss()

Real ccss	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	V,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	HT
	)

inline

Definition at line 759 of file IonicTenTusscher06.hpp.

◆ solveCaSS()

Real solveCaSS	(	Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	RR,
		Real	V,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	HT
	)

inline

Definition at line 763 of file IonicTenTusscher06.hpp.

◆ CaBuf()

Real CaBuf ( Real Cai )

inline

Definition at line 770 of file IonicTenTusscher06.hpp.

◆ dCai()

Real dCai	(	Real	V,
		Real	Nai,
		Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	HT = `1.0`
	)

inline

Definition at line 774 of file IonicTenTusscher06.hpp.

◆ bc()

Real bc	(	Real	V,
		Real	Nai,
		Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	HT
	)

inline

Definition at line 781 of file IonicTenTusscher06.hpp.

◆ cc()

Real cc	(	Real	V,
		Real	Nai,
		Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	HT
	)

inline

Definition at line 785 of file IonicTenTusscher06.hpp.

◆ solveCai()

Real solveCai	(	Real	V,
		Real	Nai,
		Real	Cai,
		Real	CaSR,
		Real	CaSS,
		Real	HT
	)

inline

Definition at line 789 of file IonicTenTusscher06.hpp.

◆ dNai()

Real dNai	(	Real	V,
		Real	m,
		Real	h,
		Real	j,
		Real	Nai,
		Real	Cai
	)

inline

Definition at line 797 of file IonicTenTusscher06.hpp.

◆ solveNai()

Real solveNai	(	Real	V,
		Real	m,
		Real	h,
		Real	j,
		Real	Nai,
		Real	Cai,
		Real	HT
	)

inline

Definition at line 804 of file IonicTenTusscher06.hpp.

◆ dKi()

Real dKi	(	Real	V,
		Real	r,
		Real	s,
		Real	xr1,
		Real	xr2,
		Real	xs,
		Real	Nai,
		Real	Ki
	)

inline

Definition at line 809 of file IonicTenTusscher06.hpp.

◆ solveKi()

Real solveKi	(	Real	V,
		Real	r,
		Real	s,
		Real	xr1,
		Real	xr2,
		Real	xs,
		Real	Nai,
		Real	Ki,
		Real	HT
	)

inline

Definition at line 819 of file IonicTenTusscher06.hpp.

◆ AM()

Real AM ( Real V )

inline

Definition at line 825 of file IonicTenTusscher06.hpp.

◆ BM()

Real BM ( Real V )

inline

Definition at line 829 of file IonicTenTusscher06.hpp.

◆ TAU_M()

Real TAU_M ( Real V )

inline

Definition at line 834 of file IonicTenTusscher06.hpp.

◆ M_INF()

Real M_INF ( Real V )

inline

Definition at line 838 of file IonicTenTusscher06.hpp.

◆ AH()

Real AH ( Real V )

inline

Definition at line 843 of file IonicTenTusscher06.hpp.

◆ BH()

Real BH ( Real V )

inline

Definition at line 854 of file IonicTenTusscher06.hpp.

◆ TAU_H()

Real TAU_H ( Real V )

inline

Definition at line 865 of file IonicTenTusscher06.hpp.

◆ H_INF()

Real H_INF ( Real V )

inline

Definition at line 870 of file IonicTenTusscher06.hpp.

◆ AJ()

Real AJ ( Real V )

inline

Definition at line 876 of file IonicTenTusscher06.hpp.

◆ BJ()

Real BJ ( Real V )

inline

Definition at line 888 of file IonicTenTusscher06.hpp.

◆ TAU_J()

Real TAU_J ( Real V )

inline

Definition at line 898 of file IonicTenTusscher06.hpp.

◆ J_INF()

Real J_INF ( Real V )

inline

Definition at line 902 of file IonicTenTusscher06.hpp.

◆ Xr1_INF()

Real Xr1_INF ( Real V )

inline

Definition at line 907 of file IonicTenTusscher06.hpp.

◆ axr1()

Real axr1 ( Real V )

inline

Definition at line 911 of file IonicTenTusscher06.hpp.

◆ bxr1()

Real bxr1 ( Real V )

inline

Definition at line 915 of file IonicTenTusscher06.hpp.

◆ TAU_Xr1()

Real TAU_Xr1 ( Real V )

inline

Definition at line 919 of file IonicTenTusscher06.hpp.

◆ Xr2_INF()

Real Xr2_INF ( Real V )

inline

Definition at line 923 of file IonicTenTusscher06.hpp.

◆ axr2()

Real axr2 ( Real V )

inline

Definition at line 927 of file IonicTenTusscher06.hpp.

◆ bxr2()

Real bxr2 ( Real V )

inline

Definition at line 931 of file IonicTenTusscher06.hpp.

◆ TAU_Xr2()

Real TAU_Xr2 ( Real V )

inline

Definition at line 935 of file IonicTenTusscher06.hpp.

◆ Xs_INF()

Real Xs_INF ( Real V )

inline

Definition at line 940 of file IonicTenTusscher06.hpp.

◆ Axs()

Real Axs ( Real V )

inline

Definition at line 944 of file IonicTenTusscher06.hpp.

◆ Bxs()

Real Bxs ( Real V )

inline

Definition at line 948 of file IonicTenTusscher06.hpp.

◆ TAU_Xs()

Real TAU_Xs ( Real V )

inline

Definition at line 952 of file IonicTenTusscher06.hpp.

◆ R_INF()

Real R_INF ( Real V )

inline

Definition at line 957 of file IonicTenTusscher06.hpp.

◆ S_INF()

Real S_INF ( Real V )

inline

Definition at line 961 of file IonicTenTusscher06.hpp.

◆ TAU_R()

Real TAU_R ( Real V )

inline

Definition at line 976 of file IonicTenTusscher06.hpp.

◆ TAU_S()

Real TAU_S ( Real V )

inline

Definition at line 980 of file IonicTenTusscher06.hpp.

◆ D_INF()

Real D_INF ( Real V )

inline

Definition at line 995 of file IonicTenTusscher06.hpp.

◆ Ad()

Real Ad ( Real V )

inline

Definition at line 999 of file IonicTenTusscher06.hpp.

◆ Bd()

Real Bd ( Real V )

inline

Definition at line 1003 of file IonicTenTusscher06.hpp.

◆ Cd()

Real Cd ( Real V )

inline

Definition at line 1007 of file IonicTenTusscher06.hpp.

◆ TAU_D()

Real TAU_D ( Real V )

inline

Definition at line 1011 of file IonicTenTusscher06.hpp.

◆ F_INF()

Real F_INF ( Real V )

inline

Definition at line 1015 of file IonicTenTusscher06.hpp.

◆ Af()

Real Af ( Real V )

inline

Definition at line 1019 of file IonicTenTusscher06.hpp.

◆ Bf()

Real Bf ( Real V )

inline

Definition at line 1023 of file IonicTenTusscher06.hpp.

◆ Cf()

Real Cf ( Real V )

inline

Definition at line 1027 of file IonicTenTusscher06.hpp.

◆ TAU_F()

Real TAU_F ( Real V )

inline

Definition at line 1031 of file IonicTenTusscher06.hpp.

◆ F2_INF()

Real F2_INF ( Real V )

inline

Definition at line 1035 of file IonicTenTusscher06.hpp.

◆ Af2()

Real Af2 ( Real V )

inline

Definition at line 1039 of file IonicTenTusscher06.hpp.

◆ Bf2()

Real Bf2 ( Real V )

inline

Definition at line 1043 of file IonicTenTusscher06.hpp.

◆ Cf2()

Real Cf2 ( Real V )

inline

Definition at line 1047 of file IonicTenTusscher06.hpp.

◆ TAU_F2()

Real TAU_F2 ( Real V )

inline

Definition at line 1051 of file IonicTenTusscher06.hpp.

◆ FCaSS_INF()

Real FCaSS_INF ( Real CaSS )

inline

Definition at line 1055 of file IonicTenTusscher06.hpp.

◆ TAU_FCaSS()

Real TAU_FCaSS ( Real CaSS )

inline

Definition at line 1059 of file IonicTenTusscher06.hpp.

◆ solveM()

Real solveM	(	Real	V,
		Real	m,
		Real	HT
	)

inline

Definition at line 1065 of file IonicTenTusscher06.hpp.

◆ solveH()

Real solveH	(	Real	V,
		Real	h,
		Real	HT
	)

inline

Definition at line 1069 of file IonicTenTusscher06.hpp.

◆ solveJ()

Real solveJ	(	Real	V,
		Real	j,
		Real	HT
	)

inline

Definition at line 1073 of file IonicTenTusscher06.hpp.

◆ solveXr1()

Real solveXr1	(	Real	V,
		Real	xr1,
		Real	HT
	)

inline

Definition at line 1077 of file IonicTenTusscher06.hpp.

◆ solveXr2()

Real solveXr2	(	Real	V,
		Real	xr2,
		Real	HT
	)

inline

Definition at line 1081 of file IonicTenTusscher06.hpp.

◆ solveXs()

Real solveXs	(	Real	V,
		Real	xs,
		Real	HT
	)

inline

Definition at line 1085 of file IonicTenTusscher06.hpp.

◆ solveS()

Real solveS	(	Real	V,
		Real	s,
		Real	HT
	)

inline

Definition at line 1089 of file IonicTenTusscher06.hpp.

◆ solveR()

Real solveR	(	Real	V,
		Real	r,
		Real	HT
	)

inline

Definition at line 1093 of file IonicTenTusscher06.hpp.

◆ solveD()

Real solveD	(	Real	V,
		Real	d,
		Real	HT
	)

inline

Definition at line 1097 of file IonicTenTusscher06.hpp.

◆ solveF()

Real solveF	(	Real	V,
		Real	f,
		Real	HT
	)

inline

Definition at line 1101 of file IonicTenTusscher06.hpp.

◆ solveF2()

Real solveF2	(	Real	V,
		Real	f2,
		Real	HT
	)

inline

Definition at line 1105 of file IonicTenTusscher06.hpp.

◆ solveFCaSS()

Real solveFCaSS	(	Real	CaSS,
		Real	fcass,
		Real	HT
	)

inline

Definition at line 1109 of file IonicTenTusscher06.hpp.

◆ dM()

Real dM	(	Real	V,
		Real	m
	)

inline

Definition at line 1115 of file IonicTenTusscher06.hpp.

◆ dH()

Real dH	(	Real	V,
		Real	h
	)

inline

Definition at line 1119 of file IonicTenTusscher06.hpp.

◆ dJ()

Real dJ	(	Real	V,
		Real	j
	)

inline

Definition at line 1123 of file IonicTenTusscher06.hpp.

◆ dXr1()

Real dXr1	(	Real	V,
		Real	xr1
	)

inline

Definition at line 1127 of file IonicTenTusscher06.hpp.

◆ dXr2()

Real dXr2	(	Real	V,
		Real	xr2
	)

inline

Definition at line 1131 of file IonicTenTusscher06.hpp.

◆ dXs()

Real dXs	(	Real	V,
		Real	xs
	)

inline

Definition at line 1135 of file IonicTenTusscher06.hpp.

◆ dS()

Real dS	(	Real	V,
		Real	s
	)

inline

Definition at line 1139 of file IonicTenTusscher06.hpp.

◆ dR()

Real dR	(	Real	V,
		Real	r
	)

inline

Definition at line 1143 of file IonicTenTusscher06.hpp.

◆ dD()

Real dD	(	Real	V,
		Real	d
	)

inline

Definition at line 1147 of file IonicTenTusscher06.hpp.

◆ dF()

Real dF	(	Real	V,
		Real	f
	)

inline

Definition at line 1151 of file IonicTenTusscher06.hpp.

◆ dF2()

Real dF2	(	Real	V,
		Real	f2
	)

inline

Definition at line 1155 of file IonicTenTusscher06.hpp.

◆ dFCaSS()

Real dFCaSS	(	Real	CaSS,
		Real	fcass
	)

inline

Definition at line 1159 of file IonicTenTusscher06.hpp.

◆ solveV()

Real solveV	(	Real	V,
		Real	m,
		Real	h,
		Real	j,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	r,
		Real	s,
		Real	xr1,
		Real	xr2,
		Real	xs,
		Real	Nai,
		Real	Ki,
		Real	Cai,
		Real	CaSS,
		Real	HT
	)

inline

Definition at line 1166 of file IonicTenTusscher06.hpp.

◆ computeGatingRhs()

void computeGatingRhs	(	const std::vector< Real > &	v,
		std::vector< Real > &	rhs
	)

virtual

Methods.

Implements ElectroIonicModel.

Definition at line 507 of file IonicTenTusscher06.cpp.

◆ computeNonGatingRhs()

void computeNonGatingRhs	(	const std::vector< Real > &	v,
		std::vector< Real > &	rhs
	)

virtual

In the case this method is improperly used, it should use this default implementation.

This method should be used together with the Rush-Larsen time advancing scheme

Parameters

v	vector of state variables including the voltage (with n elements)
rhs	vector of right hand side state variables excluding the voltage and the gating variables (with n-g-1 elements)

Reimplemented from ElectroIonicModel.

Definition at line 568 of file IonicTenTusscher06.cpp.

◆ computeRhs()

void computeRhs	(	const std::vector< Real > &	v,
		std::vector< Real > &	rhs
	)

virtual

This methods contains the actual evaluation of the rhs of all state variablesin the model (0D version)

Although this method can just wrap the computeGatingRhs ( const std::vector<Real>& v, std::vector<Real>& rhs ) and the computeLocalPotentialRhs ( const std::vector<Real>& v ) methods, for efficiency it may be better to duplicate the code.

Parameters

v	vector of state variables including the voltage (with n elements)
rhs	vector of right hand side state variables including the voltage (with n elements)

Implements ElectroIonicModel.

Definition at line 573 of file IonicTenTusscher06.cpp.

◆ computeLocalPotentialRhs()

Real computeLocalPotentialRhs ( const std::vector< Real > & v )

virtual

This methods contains the actual evaluation of the rhs of the voltage equation only (0D version)

Parameters

v	vector of state variables including the voltage (with n elements)

Implements ElectroIonicModel.

Definition at line 638 of file IonicTenTusscher06.cpp.

◆ computeGatingVariablesWithRushLarsen()

void computeGatingVariablesWithRushLarsen	(	std::vector< Real > &	,
		const Real
	)

virtual

This methods contains the actual evaluation of the rhs of the voltage equation only (0D version)

Overload this method in order to solve the ionic model with the Rush-Larsen method in the monodomain solver

Parameters

v	vector of state variables
dt	time step of the simulation

Reimplemented from ElectroIonicModel.

Definition at line 666 of file IonicTenTusscher06.cpp.

◆ showMe()

void showMe ( )

virtual

Display information about the model.

Implements ElectroIonicModel.

Definition at line 710 of file IonicTenTusscher06.cpp.

◆ showCurrents() [1/2]

void showCurrents ( std::vector< Real > & v )

Definition at line 757 of file IonicTenTusscher06.cpp.

◆ showCurrents() [2/2]

void showCurrents	(	Real	V,
		Real	m,
		Real	h,
		Real	j,
		Real	d,
		Real	f,
		Real	f2,
		Real	fcass,
		Real	r,
		Real	s,
		Real	xr1,
		Real	xr2,
		Real	xs,
		Real	Nai,
		Real	Ki,
		Real	Cai,
		Real	CaSS
	)

Definition at line 780 of file IonicTenTusscher06.cpp.

◆ solveOneStep()

void solveOneStep	(	std::vector< Real > &	v,
		Real	dt
	)

Definition at line 719 of file IonicTenTusscher06.cpp.

◆ getFlag()

WallFlag getFlag ( )

inline

Definition at line 1206 of file IonicTenTusscher06.hpp.

Field Documentation

◆ knak

Real knak

private

Model Parameters.

Definition at line 1216 of file IonicTenTusscher06.hpp.

◆ KmNa

Real KmNa

private

Definition at line 1217 of file IonicTenTusscher06.hpp.

◆ KmK

Real KmK

private

Definition at line 1218 of file IonicTenTusscher06.hpp.

◆ knaca

Real knaca

private

Definition at line 1219 of file IonicTenTusscher06.hpp.

◆ KmNai

Real KmNai

private

Definition at line 1220 of file IonicTenTusscher06.hpp.

◆ KmCa

Real KmCa

private

Definition at line 1221 of file IonicTenTusscher06.hpp.

◆ ksat

Real ksat

private

Definition at line 1222 of file IonicTenTusscher06.hpp.

◆ n

Real n

private

Definition at line 1223 of file IonicTenTusscher06.hpp.

◆ Ko

Real Ko

private

Definition at line 1226 of file IonicTenTusscher06.hpp.

◆ Cao

Real Cao

private

Definition at line 1227 of file IonicTenTusscher06.hpp.

◆ Nao

Real Nao

private

Definition at line 1228 of file IonicTenTusscher06.hpp.

◆ Bufc

Real Bufc

private

Definition at line 1231 of file IonicTenTusscher06.hpp.

◆ Kbufc

Real Kbufc

private

Definition at line 1232 of file IonicTenTusscher06.hpp.

◆ Bufsr

Real Bufsr

private

Definition at line 1233 of file IonicTenTusscher06.hpp.

◆ Kbufsr

Real Kbufsr

private

Definition at line 1234 of file IonicTenTusscher06.hpp.

◆ Bufss

Real Bufss

private

Definition at line 1235 of file IonicTenTusscher06.hpp.

◆ Kbufss

Real Kbufss

private

Definition at line 1236 of file IonicTenTusscher06.hpp.

◆ Vmaxup

Real Vmaxup

private

Definition at line 1238 of file IonicTenTusscher06.hpp.

◆ Kup

Real Kup

private

Definition at line 1239 of file IonicTenTusscher06.hpp.

◆ Vrel

Real Vrel

private

Definition at line 1240 of file IonicTenTusscher06.hpp.

◆ k1_

Real k1_

private

Definition at line 1241 of file IonicTenTusscher06.hpp.

◆ k2_

Real k2_

private

Definition at line 1242 of file IonicTenTusscher06.hpp.

◆ k3

Real k3

private

Definition at line 1243 of file IonicTenTusscher06.hpp.

◆ k4

Real k4

private

Definition at line 1244 of file IonicTenTusscher06.hpp.

◆ EC

Real EC

private

Definition at line 1245 of file IonicTenTusscher06.hpp.

◆ maxsr

Real maxsr

private

Definition at line 1246 of file IonicTenTusscher06.hpp.

◆ minsr

Real minsr

private

Definition at line 1247 of file IonicTenTusscher06.hpp.

◆ Vleak

Real Vleak

private

Definition at line 1248 of file IonicTenTusscher06.hpp.

◆ Vxfer

Real Vxfer

private

Definition at line 1249 of file IonicTenTusscher06.hpp.

◆ pKNa

Real pKNa

private

Definition at line 1252 of file IonicTenTusscher06.hpp.

◆ RTONF

Real RTONF

private

Definition at line 1254 of file IonicTenTusscher06.hpp.

◆ F

Real F

private

Definition at line 1255 of file IonicTenTusscher06.hpp.

◆ R

Real R

private

Definition at line 1256 of file IonicTenTusscher06.hpp.

◆ T

Real T

private

Definition at line 1257 of file IonicTenTusscher06.hpp.

◆ Gkr

Real Gkr

private

Definition at line 1260 of file IonicTenTusscher06.hpp.

◆ Gks

Real Gks

private

Definition at line 1261 of file IonicTenTusscher06.hpp.

◆ GK1

Real GK1

private

Definition at line 1262 of file IonicTenTusscher06.hpp.

◆ Gto

Real Gto

private

Definition at line 1263 of file IonicTenTusscher06.hpp.

◆ GNa

Real GNa

private

Definition at line 1264 of file IonicTenTusscher06.hpp.

◆ GbNa

Real GbNa

private

Definition at line 1265 of file IonicTenTusscher06.hpp.

◆ GCaL

Real GCaL

private

Definition at line 1266 of file IonicTenTusscher06.hpp.

◆ GbCa

Real GbCa

private

Definition at line 1267 of file IonicTenTusscher06.hpp.

◆ GpCa

Real GpCa

private

Definition at line 1268 of file IonicTenTusscher06.hpp.

◆ KpCa

Real KpCa

private

Definition at line 1269 of file IonicTenTusscher06.hpp.

◆ GpK

Real GpK

private

Definition at line 1270 of file IonicTenTusscher06.hpp.

◆ Vc

Real Vc

private

Definition at line 1273 of file IonicTenTusscher06.hpp.

◆ Vsr

Real Vsr

private

Definition at line 1274 of file IonicTenTusscher06.hpp.

◆ Vss

Real Vss

private

Definition at line 1275 of file IonicTenTusscher06.hpp.

◆ inverseVcF2

Real inverseVcF2

private

Definition at line 1277 of file IonicTenTusscher06.hpp.

◆ inverseVcF

Real inverseVcF

private

Definition at line 1278 of file IonicTenTusscher06.hpp.

◆ inversevssF2

Real inversevssF2

private

Definition at line 1279 of file IonicTenTusscher06.hpp.

◆ flag

WallFlag flag

private

Definition at line 1281 of file IonicTenTusscher06.hpp.

◆ M_cellularCapacitance

Real M_cellularCapacitance

private

Definition at line 1283 of file IonicTenTusscher06.hpp.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Private Attributes

Type definitions

Constructors & Destructor

Overloads

Setters and getters

Methods

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ super

◆ vectorPtr_Type

◆ elvecPtr_Type

◆ mesh_Type

Member Enumeration Documentation

◆ WallFlag

Constructor & Destructor Documentation

◆ IonicTenTusscher06() [1/3]

◆ IonicTenTusscher06() [2/3]

◆ IonicTenTusscher06() [3/3]

◆ ~IonicTenTusscher06()

Member Function Documentation

◆ operator=()

◆ getknak()

◆ getKmNa()

◆ getKmK()

◆ getknaca()

◆ getKmNai()

◆ getKmCa()

◆ getksat()

◆ getn()

◆ getKo()

◆ getCao()

◆ getNao()

◆ getBufc()

◆ getKbufc()

◆ getBufsr()

◆ getKbufsr()

◆ getBufss()

◆ getKbufss()

◆ getVmaxup()

◆ getKup()

◆ getVrel()

◆ getk1_()

◆ getk2_()

◆ getk3()

◆ getk4()

◆ getEC()

◆ getmaxsr()

◆ getminsr()

◆ getVleak()

◆ getVxfer()

◆ getpKNa()

◆ getRTONF()

◆ getF()

◆ getR()

◆ getT()

◆ getGkr()

◆ getGks()

◆ getGK1()

◆ getGto()

◆ getGNa()

◆ getGbNa()

◆ getGCaL()

◆ getGbCa()

◆ getGpCa()

◆ getKpCa()

◆ getGpK()

◆ getVc()

◆ getVsr()

◆ getVss()

◆ setknak()

◆ setKmNa()

◆ setKmK()

◆ setknaca()

◆ setKmNai()

◆ setKmCa()

◆ setksat()

◆ setn()